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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs5998366 chr22:32665525 C/T SMCR7L chr22:39896105-39914136:+ 0.76 9.56 6.44E-20 Box Plot
THCA rs5998366 chr22:32665525 C/T SNAP29 chr22:21213271-21245506:+ 0.8 7.07 5.44E-12 Box Plot
THCA rs5998366 chr22:32665525 C/T SNRPD3 chr22:24951471-25005947:+ 0.74 8.97 6.99E-18 Box Plot
THCA rs5998366 chr22:32665525 C/T SRRD chr22:26879843-26890624:+ 0.9 9 5.42E-18 Box Plot
THCA rs5998366 chr22:32665525 C/T ST13 chr22:41220539-41253026:- 0.74 8.47 3.06E-16 Box Plot
THCA rs5998366 chr22:32665525 C/T TAB1 chr22:39795746-39833065:+ 0.74 7.32 1.03E-12 Box Plot
THCA rs5998366 chr22:32665525 C/T TBC1D10A chr22:30687979-30723035:- 0.48 5.98 4.4E-9 Box Plot
THCA rs5998366 chr22:32665525 C/T TCF20 chr22:42556019-42739622:- 0.77 8.68 6.4E-17 Box Plot
THCA rs5998366 chr22:32665525 C/T TFIP11 chr22:26887191-26908471:- 0.88 8.63 9.46E-17 Box Plot
THCA rs5998366 chr22:32665525 C/T THAP7 chr22:21353393-21356485:- 0.55 8.06 6.09E-15 Box Plot
THCA rs5998366 chr22:32665525 C/T THOC5 chr22:29901868-29951205:- 0.58 7.62 1.38E-13 Box Plot
THCA rs5998366 chr22:32665525 C/T TMEM184B chr22:38615298-38669040:- 0.48 6.33 5.72E-10 Box Plot
THCA rs5998366 chr22:32665525 C/T TMEM54 chr1:33360195-33367039:- -0.5 -6.13 1.8E-9 Box Plot
THCA rs5998366 chr22:32665525 C/T TNRC6B chr22:40440821-40731812:+ 0.57 7.18 2.62E-12 Box Plot
THCA rs5998366 chr22:32665525 C/T TOB2 chr22:41829496-41843027:- 0.7 6.64 8.34E-11 Box Plot